G.M. Singharoy: search on Z-Library

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1

Identity and Its Transformative Dynamics in Knowledge Era: Some Critical Reflections

SinghaRoy, Debal K.

Journal:

Contemporary Education Dialogue

Year:

2019

Language:

english

File:

PDF, 655 KB

english, 2019

2

Computational Methodologies for Real-Space Structural Refinement of Large Macromolecular Complexes

Goh, Boon Chong, Hadden, Jodi A., Bernardi, Rafael C., Singharoy, Abhishek, McGreevy, Ryan, Rudack, Till, Cassidy, C. Keith, Schulten, Klaus

Journal:

Annual Review of Biophysics

Year:

2016

Language:

english

File:

PDF, 4.97 MB

english, 2016

3

Atoms to Phenotypes: Molecular Design Principles of Cellular Energy Metabolism

Singharoy, Abhishek, Maffeo, Christopher, Delgado-Magnero, Karelia H., Swainsbury, David J.K., Sener, Melih, Kleinekathöfer, Ulrich, Vant, John W., Nguyen, Jonathan, Hitchcock, Andrew, Isralewitz, Bar

Journal:

Year:

2019

Language:

english

File:

PDF, 11.06 MB

english, 2019

4

Quasiperiodic oscillation and possible Second Law violation in a nanosystem

Quick, R., Singharoy, A., Ortoleva, P.

Journal:

Chemical Physics Letters

Year:

2013

Language:

english

File:

PDF, 1.08 MB

english, 2013

5

Overall energy conversion efficiency of a photosynthetic vesicle

Sener, Melih, Strumpfer, Johan, Singharoy, Abhishek, Hunter, C Neil, Schulten, Klaus

Journal:

Year:

2016

Language:

english

File:

PDF, 2.59 MB

english, 2016

6

Mechanical behaviour of fire-exposed fibre-reinforced sustainable concrete

Sahani, Ashok Kumar, Samanta, Amiya K., Singharoy, Dilip K.

Journal:

Journal of Structural Fire Engineering

Year:

2019

File:

PDF, 3.92 MB

2019

7

Chemomechanical Coupling in Hexameric Protein–Protein Interfaces Harnesses Energy within V-Type ATPases

Singharoy, Abhishek, Chipot, Christophe, Moradi, Mahmoud, Schulten, Klaus

Journal:

Journal of the American Chemical Society

Year:

2017

Language:

english

File:

PDF, 19.35 MB

english, 2017

8

Reclaiming of ground rubber tire by a novel reclaiming agent. I. virgin natural rubber/reclaimed GRT vulcanizates

Debapriya De, Debasish De, G.M. Singharoy

Journal:

Polymer Engineering & Science

Year:

2007

Language:

english

File:

PDF, 452 KB

english, 2007

9

Order parameters for macromolecules: Application to multiscale simulation

Singharoy, A., Cheluvaraja, S., Ortoleva, P.

Journal:

The Journal of Chemical Physics

Year:

2011

Language:

english

File:

PDF, 1.37 MB

english, 2011

10

Tribal Peasantry in West Bengal : Development, Domination, Dependency and Alternative

Debal K. Singharoy

Journal:

Indian Anthropologist

Year:

2004

Language:

english

File:

PDF, 1.34 MB

english, 2004

11

Inclusion of ph Effects in Molecular Dynamics Simulations of Membranes and Membrane Proteins

Radak, Brian K., Singharoy, Abhishek, Schulten, Klaus, Roux, Benoit

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 40 KB

english, 2016

12

Towards a Knowledge Society (New Identities in Emerging India) || Introduction: Conceptualising Knowledge Society: Critical Dimensions and Ideal Image

SinghaRoy, Debal K.

Year:

2014

File:

PDF, 546 KB

2014

13

Discovering Free Energy Basins for Macromolecular Systems via Guided Multiscale Simulation

Sereda, Yuriy V., Singharoy, Abhishek B., Jarrold, Martin F., Ortoleva, Peter J.

Journal:

Journal of Physical Chemistry B

Year:

2012

Language:

english

File:

PDF, 4.96 MB

english, 2012

14

Atom-Resolved View of a Cell Organelle on a Computational Microscope

Singharoy, Abhishek, Schulten, Klaus

Journal:

Biophysical Journal

Year:

2017

Language:

english

File:

PDF, 47 KB

english, 2017

15

Towards a Knowledge Society (New Identities in Emerging India) || Critiquing and Contextualising Knowledge Society

SinghaRoy, Debal K.

Year:

2014

File:

PDF, 339 KB

2014

16

Retrieving functional pathways of biomolecules from single-particle snapshots

Dashti, Ali, Mashayekhi, Ghoncheh, Shekhar, Mrinal, Ben Hail, Danya, Salah, Salah, Schwander, Peter, des Georges, Amedee, Singharoy, Abhishek, Frank, Joachim, Ourmazd, Abbas

Journal:

Nature Communications

Year:

2020

File:

PDF, 2.63 MB

2020

17

Hierarchical multiscale modeling of macromolecules and their assemblies

Ortoleva, P., Singharoy, A., Pankavich, S.

Journal:

Year:

2013

Language:

english

File:

PDF, 1021 KB

english, 2013

18

Macromolecular Crystallography for Synthetic Abiological Molecules: Combining xMDFF and PHENIX for Structure Determination of Cyanostar Macrocycles

Singharoy, Abhishek, Venkatakrishnan, Balasubramanian, Liu, Yun, Mayne, Christopher G., Lee, Semin, Chen, Chun-Hsing, Zlotnick, Adam, Schulten, Klaus, Flood, Amar H.

Journal:

Journal of the American Chemical Society

Year:

2015

Language:

english

File:

PDF, 3.92 MB

english, 2015

19

Towards a Knowledge Society (New Identities in Emerging India) || Education for Knowledge Society in India

SinghaRoy, Debal K.

Year:

2014

File:

PDF, 1.01 MB

2014

20

Quasiequivalence of multiscale coevolution and ensemble MD simulations: A demonstration with lactoferrin

Yang, J., Singharoy, A., Sereda, Yu.V., Ortoleva, P.J.

Journal:

Chemical Physics Letters

Year:

2014

Language:

english

File:

PDF, 2.09 MB

english, 2014

21

Towards a Knowledge Society (New Identities in Emerging India) || Information and Communication Technologies for Knowledge Society

SinghaRoy, Debal K.

Year:

2014

File:

PDF, 630 KB

2014

22

New Perspectives on Quinol Binding Motifs at the bc1 Complex Based on MD Simulations

Barragan, Angela M., Singharoy, Abhishek, Crofts, Anthony R., Schulten, Klaus, Solov’yov, Ilia A.

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 68 KB

english, 2015

23

Advances in the molecular dynamics flexible fitting method for cryo-EM modeling

McGreevy, Ryan, Teo, Ivan, Singharoy, Abhishek, Schulten, Klaus

Journal:

Year:

2016

Language:

english

File:

PDF, 1.84 MB

english, 2016

24

Applicability of doctrine of equivalent and prosecution history estoppels in Indian patent system

Bandyopadhyay, Tapas, Singharoy, Tuhin

Journal:

International Journal of Intellectual Property Management

Year:

2012

Language:

english

File:

PDF, 157 KB

english, 2012

25

Performance of summer sesame (Sesamum indicum L.) cultivars under varying dates of sowing in prevailing agro-climatic condition of North Bengal

Saikat, Chongdar, Anando, Singharoy, Ashok, Saha, Binoy, Chhetri

Journal:

Scientific Research and Essays

Year:

2015

Language:

english

File:

PDF, 562 KB

english, 2015

26

Photophysical studies of the dye 1-Anilinonapthalene-8-sulfonic acid in different solvents and its quantum chemical investigation

Sinha, Timir Baran, Singharoy, Dipti, Das, Himadri Sekhar, Gupta, Suvroma, Khatua, Pijus Kanti

Journal:

Journal of Molecular Structure

Year:

2018

Language:

english

File:

PDF, 2.23 MB

english, 2018

27

Towards a Knowledge Society (New Identities in Emerging India) || Indian Growth Story: Service and Knowledge Dynamics

SinghaRoy, Debal K.

Year:

2014

File:

PDF, 641 KB

2014

28

Hierarchical Order Parameters for Macromolecular Assembly Simulations. 1. Construction and Dynamical Properties of Order Parameters

Singharoy, Abhishek, Sereda, Yuriy, Ortoleva, Peter J.

Journal:

Journal of Chemical Theory and Computation

Year:

2012

Language:

english

File:

PDF, 4.40 MB

english, 2012

29

xMDFF: molecular dynamics flexible fitting of low-resolution X-ray structures

McGreevy, Ryan, Singharoy, Abhishek, Li, Qufei, Zhang, Jingfen, Xu, Dong, Perozo, Eduardo, Schulten, Klaus

Journal:

Acta Crystallographica Section D Biological Crystallography

Year:

2014

Language:

english

File:

PDF, 1.71 MB

english, 2014

30

Inchworm movement of two rings switching onto a thread by biased Brownian diffusion represent a three-body problem

Benson, Christopher R., Maffeo, Christopher, Fatila, Elisabeth M., Liu, Yun, Sheetz, Edward G., Aksimentiev, Aleksei, Singharoy, Abhishek, Flood, Amar H.

Journal:

Proceedings of the National Academy of Sciences

Year:

2018

Language:

english

File:

PDF, 1.28 MB

english, 2018

31

Perceptive of block co polymers as potential delivering system of synthesized pyridine and pyrimidine derivatives: Spectroscopic and computational approach

Ghosh, Swadesh, Singharoy, Dipti, Naskar, Jnan Prakash, Bhattacharya, Subhash Chandra

Journal:

Journal of Molecular Liquids

Year:

2019

File:

PDF, 1.15 MB

2019

32

Towards a Knowledge Society (New Identities in Emerging India) || Knowledge Society: Work, Workers and Work Relations

SinghaRoy, Debal K.

Year:

2014

File:

PDF, 909 KB

2014

33

Towards a Knowledge Society (New Identities in Emerging India) || Knowledge Society: Culture, Continuity and Contradictions

SinghaRoy, Debal K.

Year:

2014

File:

PDF, 711 KB

2014

34

Anionic Lipids Confine Cytochrome c2 to the Vicinity of Bioenergetic Membranes without Compromising its Interaction with Membrane-Embedded Redox Partners

Chan, Chun Kit, Singharoy, Abhishek, Tajkhorshid, Emad

Journal:

Biophysical Journal

Year:

2020

File:

PDF, 49 KB

2020

35

Epitope engineering and molecular metrics of immunogenicity: A computational approach to VLP-based vaccine design

Joshi, Harshad, Lewis, Kristen, Singharoy, Abhishek, Ortoleva, Peter J.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.02 MB

english, 2013

36

Towards a Knowledge Society (New Identities in Emerging India) || Conclusion: Marginality, Identity, Fluidity and Beyond

SinghaRoy, Debal K.

Year:

2014

File:

PDF, 2.27 MB

2014

37

Structural mechanism of voltage-dependent gating in an isolated voltage-sensing domain

Li, Qufei, Wanderling, Sherry, Paduch, Marcin, Medovoy, David, Singharoy, Abhishek, McGreevy, Ryan, Villalba-Galea, Carlos A, Hulse, Raymond E, Roux, Benoît, Schulten, Klaus, Kossiakoff, Anthony, Pero

Journal:

Nature Structural and Molecular Biology

Year:

2014

Language:

english

File:

PDF, 1.39 MB

english, 2014

38

Towards the Simulation of a Complete ATP Synthase: Unravelling the Structural Basis of the Enzyme's Reversible Action

Singharoy, Abhishek, Schulten, Klaus

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 39 KB

english, 2015

39

Anomalous transients in GPS measurements due to induced changes in local site conditions

Gupta, Sandeep, Singharoy, Paresh Nath, Yadav, Rajeev Kumar, Catherine, Joshi K, Burgmann, Roland, Gahalaut, Vineet K

Journal:

Journal of Earth System Science

Year:

2019

Language:

english

File:

PDF, 1.34 MB

english, 2019

40

Towards a Knowledge Society (New Identities in Emerging India) || Bibliography

SinghaRoy, Debal K.

Year:

2014

File:

PDF, 400 KB

2014

41

Cryo-EM and MD infer water-mediated proton transport and autoinhibition mechanisms of V o complex

Roh, Soung-Hun, Shekhar, Mrinal, Pintilie, Grigore, Chipot, Christophe, Wilkens, Stephan, Singharoy, Abhishek, Chiu, Wah

Journal:

Science Advances

Year:

2020

File:

PDF, 4.67 MB

2020

42

Allosteric Regulation Mechanism of Trimeric Membrane

Wang, Yuhang, Singharoy, Abhi, Schulten, Klaus, Tajkhorshid, Emad

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 38 KB

english, 2016

43

Study of Ultra-Fast Rhodopsin Activation Dynamics with Molecular Dynamics Simulations

Salas, Letty, Mendez, Derek, Meza-Aguilar, José Domingo, Perera, Suchithranga M.D.C., Singharoy, Abhishek, Struts, Andrey V., Zatsepin, Nadia A., Kirian, Richard A., Grant, Thomas D., Fromme, Petra, B

Journal:

Biophysical Journal

Year:

2019

Language:

english

File:

PDF, 47 KB

english, 2019

44

Molecular Dynamics Simulations for Improving Crystal Quality and Illuminating the Function of Taspase1: A Therapeutic Target

Layton, Jacob, Nagaratnam, Nirupa, Jernigan, Rebecca J., Schneider, Joel, Flint, Andrew, Mroczkowski, Barbara, Fromme, Petra, Garcia, Jose M., Singharoy, Abhishek

Journal:

Biophysical Journal

Year:

2020

File:

PDF, 45 KB

2020

45

Hydrogen bond network analysis reveals the pathway for the proton transfer in the E-channel of T. thermophilus Complex I

Khaniya, Umesh, Gupta, Chitrak, Cai, Xiuhong, Mao, Junjun, Kaur, Divya, Zhang, Yingying, Singharoy, Abhishek, Gunner, M.R.

Journal:

Biochimica et Biophysica Acta (BBA) - Bioenergetics

Year:

2020

File:

PDF, 2.37 MB

2020

46

Micellar charge induced emissive response of a bio-active 3-pyrazolyl-2-pyrazoline derivative: a spectroscopic and quantum chemical analysis

Sarkar, Arindam, Rakshit, Soumyadipta, Chall, Sayantani, Mati, Soumya Sundar, Singharoy, Dipti, Bañuelos, Jorge, López Arbeloa, Iñigo, Bhattacharya, Subhash Chandra

Journal:

Year:

2014

Language:

english

File:

PDF, 1.06 MB

english, 2014

47

Conserved methionine dictates substrate preference in Nramp-family divalent metal transporters

Bozzi, Aaron T., Bane, Lukas B., Weihofen, Wilhelm A., McCabe, Anne L., Singharoy, Abhishek, Chipot, Christophe J., Schulten, Klaus, Gaudet, Rachelle

Journal:

Proceedings of the National Academy of Sciences

Year:

2016

Language:

english

File:

PDF, 1.02 MB

english, 2016

48

MAINMAST-MELD-MDFF: Denovo Structure-Determination with Data-Guided Molecular Dynamics

Perez, Alberto, Shekhar, Mrinal, Terashi, Genki, Kihara, Daisuke, Dill, Ken A., Tajkhorshid, Emad, Singharoy, Abhishek

Journal:

Biophysical Journal

Year:

2019

Language:

english

File:

PDF, 63 KB

english, 2019

49

Multiscale Macromolecular Simulation: Role of Evolving Ensembles

Singharoy, A., Joshi, H., Ortoleva, P. J.

Journal:

Journal of Chemical Information and Modeling

Year:

2012

Language:

english

File:

PDF, 3.11 MB

english, 2012

50

Drude Polarizable Force Field for Modeling Divalent Cations in Biological Systems

Li, Hui, Singharoy, Abhi, Roux, Benoit, MacKerell, Alexander

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 41 KB

english, 2016

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